Class BaseErrorAggregation<CALCULATOR extends BaseCalculator>

java.lang.Object
picard.sam.SamErrorMetric.BaseErrorAggregation<CALCULATOR>

public class BaseErrorAggregation<CALCULATOR extends BaseCalculator> extends Object
An interface and implementations for classes that apply a RecordAndOffsetStratifier to put bases into various "bins" and then compute an ErrorMetric on these bases using a BaseErrorCalculator.
  • Constructor Details

  • Method Details

    • addBase

      public void addBase(htsjdk.samtools.util.SamLocusIterator.RecordAndOffset recordAndOffset, htsjdk.samtools.reference.SamLocusAndReferenceIterator.SAMLocusAndReference locusInfo)
    • getSuffix

      public String getSuffix()
    • getMetrics

      public ErrorMetric[] getMetrics()