Package picard.fingerprint
Class CrosscheckMetric
java.lang.Object
htsjdk.samtools.metrics.MetricBase
picard.fingerprint.CrosscheckMetric
- Direct Known Subclasses:
ClusteredCrosscheckMetric
public class CrosscheckMetric
extends htsjdk.samtools.metrics.MetricBase
A class to hold the result of crosschecking fingerprints.
The same metric will be used for crosschecking Readgroups, libraries, samples, or files.
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Nested Class Summary
Nested ClassesModifier and TypeClassDescriptionstatic enum
static enum
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Field Summary
FieldsModifier and TypeFieldDescription -
Constructor Summary
Constructors -
Method Summary
Methods inherited from class htsjdk.samtools.metrics.MetricBase
equals, hashCode, toString
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Field Details
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LEFT_GROUP_VALUE
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RIGHT_GROUP_VALUE
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RESULT
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DATA_TYPE
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LOD_SCORE
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LOD_SCORE_TUMOR_NORMAL
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LOD_SCORE_NORMAL_TUMOR
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LEFT_RUN_BARCODE
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LEFT_LANE
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LEFT_MOLECULAR_BARCODE_SEQUENCE
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LEFT_LIBRARY
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LEFT_SAMPLE
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LEFT_FILE
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RIGHT_RUN_BARCODE
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RIGHT_LANE
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RIGHT_MOLECULAR_BARCODE_SEQUENCE
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RIGHT_LIBRARY
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RIGHT_SAMPLE
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RIGHT_FILE
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Constructor Details
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CrosscheckMetric
public CrosscheckMetric()
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